Single Cell
  1. Single Cell

tantalus_old

Public
AuthorCommitMessageCommit dateIssues
Mike YueMike Yue
97d177aeaffFinished ticket, modified css to have consistent spacing and removed nth child bs for even/odd numbered divs
Mike YueAndrew McPhersonMike Yue
a19ab4dccfeTANTA-119: Refactor bulk sample submissionTANTA-119
Mike YueAndrew McPhersonMike Yue
1219b6eeca6TANTA-129: Added file resource table to result_detailTANTA-129
Oleg GolovkoAndrew McPhersonOleg Golovko
406b57a6390TANTA-122: Search by "Sequencing library ID" brokenTANTA-122
Oleg GolovkoAndrew McPhersonOleg Golovko
291a4742d2aTANTA-100: Search by flowcell brokenTANTA-100
Mike YueAndrew McPhersonMike Yue
b185910062eTANTA-118: Submission creation page improvementsTANTA-118
Andrew McPhersonAndrew McPherson
129818f60a9TANTA-125: sequencedataset_set and results_set should not be required to create a tagTANTA-125
Matt WiensMatt Wiens
9c09bb6f8c8TANTA-121: fixup stats pageThere were some model changes made which broke the stats page. Not it ain't broke.TANTA-121
Matt WiensMatt Wiens
0d8a4c84979TANTA-121: add str representation for FileTypesThis makes it easier to see what file types currently exist through the admin page.TANTA-121
Matt WiensMatt Wiens
2bf079502ffBe less restrictive with API for storages
Andrew McPhersonAndrew McPherson
62ec51a0f45minor: filters for analyses
Mike YueAndrew McPhersonMike Yue
c3eb5f1b99dSISY-83: front end for results / analysesSISY-83
Matt WiensAndrew McPhersonMatt Wiens
2550a827ae5Render related fields as text inputs in API forms
Matt WiensAndrew McPhersonMatt Wiens
c99644d041aOrder API pages alphabeticallyWith the exception of deprecated tasks, which are listed alphabetically after the non-deprecated stuff.
Matt WiensAndrew McPhersonMatt Wiens
0e450b0ba99TANTA-97: fix FileResourceFilter field labelsSometimes the django_filter library gets confused about what a proper label should be and you need to help it out a bit.TANTA-97
Andrew McPhersonAndrew McPherson
28b3ab3a6dcminor: api filter
Matt WiensMatt Wiens
daf98c9b48fTANTA-97: refactor API filtersNow all of the filters are in the form of somewhat customizable class-based FilterSets (cf. filter_fields). Most of this is just enforcing that change and the tidy up that goes along with that. One other important change is that for *all* filters on relational fields, the browsable DRF filter widget will now be a text field (else you have drop-downs with thousands if items, which is both unusab...TANTA-97
Andrew McPhersonAndrew McPherson
7eec654cb6fminor: remove choices for reference_genome
Matt WiensAndrew McPhersonMatt Wiens
6cbc7f6beeeAdd last updated field to file res and seq datasetThe date chosen to be applied retroactively was 1960-01-01. Just something far enough back that no one will get confused about it. Probably a better default value (as suggested by Sophia) would be to sync it with the "created" field, but this only exists for File Resources and not for Sequence Datasets.
Mike YueAndrew McPhersonMike Yue
e1a021e1ce3Added admin link to api main page
Matt WiensMatt Wiens
3ba51e39debUse succinct titles for detail pages
Matt WiensMatt Wiens
fa43568031bEnable jQuery DataTable plugin for new tables
Matt WiensMatt Wiens
16cf65373e6Reorganize and improve cosmetics of home page
Matt WiensMatt Wiens
f596456bb0fFixup counter spacing on home page
Matt WiensMatt Wiens
96e8d3928c4Make top bar links a touch smallerThe same size as the Colossus ones currently are. Prior to this commit they were way too big.
Andrew McPhersonAndrew McPherson
2af9b5bf331minor: genome regions as text field
Matt WiensMatt Wiens
6127508cc40Improve filtering by analysis for seq.datasets
Matt WiensMatt Wiens
b1efd3010c9Add version field for analyses
Matt WiensMatt Wiens
045dedcf1ffAdd migration to remove GenericTask modelsThis was part of a previous pull request but I guess it got caught in merge hell?
Mike YueAndrew McPhersonMike Yue
dd300e1940dAdded result dataset link to main page, some manual css in result_detail page to make it look better
Mike YueAndrew McPhersonMike Yue
4e24817c1dcResults list/detail additions.Minor fixes for sample/patient detail pages
Mike YueAndrew McPhersonMike Yue
a492bdbe2e1more changes while waiting for andrew to reset db
Mike YueAndrew McPhersonMike Yue
f0d5d01b9deUpdated header nav bar, fixed typo in patient create page, added links for submissions and patients to main page
Mike YueAndrew McPhersonMike Yue
52e4b43f422TANTA-105 + TANTA-106 ticket improvements2 Jira issues
Mike YueAndrew McPhersonMike Yue
0fdc6c36f0aSample detail pages
Matt WiensAndrew McPhersonMatt Wiens
650c363052fRemove extraneous packages from f01b76c2ec95d0a5ac0b4ac2e2cbfa3fc3798b14
Matt WiensAndrew McPhersonMatt Wiens
c51d6285ceeFixup daca4d2b4890a6008ec989cf0febf739dc803271I thought I cleaned up all the migrations. Apparently not.
Brittany HewitsonAndrew McPhersonBrittany Hewitson
60dc323f820fixed tag bugs
Mike YueAndrew McPhersonMike Yue
89c324398beTANTA-88: Modify tantalus to replace existing spreadsheet processTANTA-88
Matt WiensAndrew McPhersonMatt Wiens
daca4d2b489Purge generic tasks from TantalusOther tasks + Celery stuff can be removed later when dependence on them is *completely* eliminated. In the meantime, removing just the generic tasks is fairly painless.
Andrew McPhersonAndrew McPherson
ab709471958minor: blank true for projects
dranewdranew
6cbbbd79d44minor: file transfer fixes
Andrew McPhersonAndrew McPherson
b26955fe38fminor: dont need admin to view blob creds
Brittany HewitsonBrittany Hewitson
bf6cc29bd11added resultsdataset_set tag to sequencedataset tag and renamed to tag
Andrew McPhersonAndrew McPherson
3b76ee8e4a7minor: base name for sequence dataset tag
Andrew McPhersonAndrew McPherson
6fc5b24db7dbugfix: missing return value for destroy
Andrew McPhersonAndrew McPherson
d48ee6a2664minor: api query by file resources filename for sequence dataset
Andrew McPhersonAndrew McPherson
b613a265d60minor: queue_prefix for storage in api
Andrew McPhersonAndrew McPherson
c77cf11727bminor: default uncompressed
Andrew McPhersonAndrew McPherson
9e5a5a51e3emigration: enforced naming convention for single cell and deleted older datasets