Production Pipelines Shah_Lab
  1. Production Pipelines Shah_Lab

strelka_pypeline

Public
AuthorCommitMessageCommit dateIssues
Sophia ChanSophia Chan
d4b08bb8bearemoved .pyc files, added threads to config
Sophia ChanSophia Chan
15445243024generate intervals within workflow
Sophia ChanSophia Chan
d0b64cb0dc3added comma
Pascale WaltersPascale Walters
424b6c39687minor: configurable num threads, added ncpus
Sophia ChanSophia Chan
7d2757dee7bconsistent arguments across pipelines
Sophia ChanSophia Chan
274b8270340updated to work with azure images
Pascale WaltersPascale Walters
ddfda3d2fd6fixed reference container
Pascale WaltersPascale Walters
4cb68e0c9b8new singularity image
Pascale WaltersPascale Walters
832dbb580d8Mmerge
Pascale WaltersPascale Walters
8d1428119b7minimum number of high mem cores to zero and fixed strelka installation
Pascale WaltersPascale Walters
de9d83d53d7corrected path for download from azure
Pascale WaltersPascale Walters
454d7d74625added correct channel for strelka version to recipe
Pascale WaltersPascale Walters
53db81202a3removed no_delete_job
Pascale WaltersPascale Walters
a0a5244fd1afixed container name
Pascale WaltersPascale Walters
3ba5fe6c957Mmerge
Pascale WaltersPascale Walters
e6e0a158ad1added input file for testing on azure
Pascale WaltersPascale Walters
af547a51400small fix to recipe file
Pascale WaltersPascale Walters
e402ba09f5bfixes to recipe
Pascale WaltersPascale Walters
6d86539eb1cfixed recipe file
Pascale WaltersPascale Walters
67f98491da9removed build directory
Pascale WaltersPascale Walters
aee7bce0345removed unused files
Pascale WaltersPascale Walters
b61648df0d0for testing on azure
Pascale WaltersPascale Walters
fcb64d805f6removed mutationseq stuff
Pascale WaltersPascale Walters
e629f07fc22added gitignore and gitattributes
Pascale WaltersPascale Walters
a358dbd21fcinitial commit