| Parent directory.. |
| Directory cBioPortal |
| Directory Cron |
| Directory ExperimentalRecords |
| Directory tools |
| Directory VariantDB_api |
| File __init__.py | 0 B |
| File changeOwner.log.sql | 48 B |
| File changeOwner.sql | 39 B |
| File checkVCF.pl | 3.94 KB |
| File collapse_snps_obs_fact.sh | 2.71 KB |
| File config.sh | 1.20 KB |
| File config.test.sh | 1.20 KB |
| File filter_experimental_records.sh | 2.33 KB |
| File get_total_snp_libs_by_pt.sh | 3.09 KB |
| File getFlanking.pl | 4.04 KB |
| File getMetaDataFiles.sh | 2.58 KB |
| File getUserInfo.sql | 81 B |
| File getVCF.sh | 1.26 KB |
| File grantGVDBReadOnly.sql | 263 B |
| File loadDummySampleDB.sh | 6.45 KB |
| File loadSampleDB.2.0.sh | 3.45 KB |
| File loadSampleDB.wrapper.sh | 2.43 KB |
| File locateNovelSNPs.py | 797 B |
| File makeMetaDataEntry.sh | 2.18 KB |
| File makeMetaDataFile.sh | 3.93 KB |
| File normalize_vcfs.py | 3.28 KB |
| File parse_snp_eff_annotations.pl | 10.83 KB |
| File post_process_experimental_records.sh | 9.15 KB |
| File process_all_experimental_records.sh | 6.74 KB |
| File qsub_experimental_records.sh | 6.08 KB |
| File query_dummy_entries.sql | 168 B |
| File query_experimental_records.sh | 8.48 KB |
| File queryENSEMBL.2.0.sh | 2.88 KB |
| File queryParser.sh | 1.73 KB |
| File queryRedactedLibraries.sh | 2.66 KB |
| File run_hawqview.sh | 1.29 KB |
| File run_snp_agg.sh | 920 B |
| File sort_vcf_file.sh | 1.86 KB |
| File tumour_ratio.py | 3.65 KB |
| File vardb_cnv.sql | 137 B |
| File vardb_gene_exp.sql | 149 B |
| File vardb_log.sql | 135 B |
| File vardb_makeMetadataFromLog.py | 2.51 KB |
| File vardb_sample.sql | 95 B |
| File vardb_WhatsNewInLogTable.py | 2.20 KB |
| File vardbCNVControlFreeC_Data_ParserAndLoader.py | 10.08 KB |
| File vardbCNVControlFreeC_Ratios_ParserAndLoader.py | 10.46 KB |
| File vardbDeleteDataFromVariantdbTablesBasedOnMd5sum.py | 27.34 KB |
| File vardbDeleteDataFromVariantdbTablesBasedOnMd5sum.test.py | 30.24 KB |
| File vardbFindOverLappingCNVsUnderPercentageOccurrence.py | 8.58 KB |
| File vardbSampleDbLoader.2.0.py | 42.71 KB |
| File vardbSampleDbLoader.2.1.py | 43.12 KB |
| File vardbSampleDbLoader.TEST.py | 43.13 KB |
| File vardbTranscriptNormalized_Data_ParserAndLoader.py | 10.59 KB |
| File vcf_formatter.pl | 4.97 KB |
| File vcf_lib_log.sql | 275 B |
| File vcf_melt | 1.30 KB |
