Data-sharing Applications Team
  1. Data-sharing Applications Team

microservice-loader

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  1. Data-sharing Applications Team
  2. microservice-loader

Commits

AuthorCommitMessageCommit dateIssues
Eleanor LewisEleanor Lewis
b7313554e2fMMerge pull request #39 in DAT/microservice-loader from release/v0.2.0 to master* commit '7bd418195320640b69164275719db3bd41fce1ee': (72 commits) require fixed flake8 version setup.cfg edited online with Bitbucket add script to add tcga brca subtype gene lists add script to load gene list tables update comments add rhabdoid loading script remove boilerplate comment start script to create tcga brca molecular subtype matrices update target compendium loader...
Eleanor LewisEleanor Lewis
7bd41819532MMerge branch 'develop' of https://svn.bcgsc.ca/bitbucket/scm/dat/microservice-loader into release/v0.2.0
Eleanor LewisEleanor Lewis
15eb0839137MMerge pull request #40 in DAT/microservice-loader from bugfix/require-flake8-version to develop* commit 'fd43e712371b3c8e505c79555be004ff66250a3f': require fixed flake8 version
Eleanor LewisEleanor Lewis
fd43e712371require fixed flake8 version
Eleanor LewisEleanor Lewis
43c31c7f6fdMMerge branch 'release/v0.2.0' of https://svn.bcgsc.ca/bitbucket/scm/dat/microservice-loader into release/v0.2.0
Eleanor LewisEleanor Lewis
f2084240fbaMMerge pull request #37 in DAT/microservice-loader from feature/VDB-1481-load-tcga-brca-subtype-gene-lists to develop* commit 'a454f4a7ac6aba12a055ec1900f315cdb7520d22': add script to add tcga brca subtype gene listsVDB-1481
Eleanor LewisEleanor Lewis
cdb0f6dc2edMMerge pull request #38 in DAT/microservice-loader from feature/VDB-1521-load-default-gene-list-info to develop* commit 'c799a222e852d421fc6ae32650ad8b6146842098': add script to load gene list tablesVDB-1521
Eleanor LewisEleanor Lewis
efe72d0109bsetup.cfg edited online with Bitbucket
Eleanor LewisEleanor Lewis
a454f4a7ac6add script to add tcga brca subtype gene lists
Eleanor LewisEleanor Lewis
c799a222e85add script to load gene list tables
Eleanor LewisEleanor Lewis
057e5a42fc3MMerge pull request #36 in DAT/microservice-loader from feature/VDB-1408-add-script-to-add-new-rhabdoid-matrix to develop* commit '1ad0d1445f35a0bfab372c61630e2291b72f92bf': update comments add rhabdoid loading scriptVDB-1408
Eleanor LewisEleanor Lewis
1ad0d1445f3update comments
Eleanor LewisEleanor Lewis
29104493851add rhabdoid loading script
Eleanor LewisEleanor Lewis
3f9e10c05b0MMerge pull request #35 in DAT/microservice-loader from feature/VDB-1514-add-tcga-brca-molecular-subtype-matrices to develop* commit '48d788e19cc057c52be03e7d22443eef11ac7631': remove boilerplate comment start script to create tcga brca molecular subtype matricesVDB-1514
Eleanor LewisEleanor Lewis
48d788e19ccremove boilerplate comment
Eleanor LewisEleanor Lewis
62544899c90MMerge pull request #34 in DAT/microservice-loader from feature/update-target-compendium-loader-script to develop* commit '95d6e8e9639411e25d6343309ab43712d151dd6b': update target compendium loader script
Eleanor LewisEleanor Lewis
4eda4f9e729start script to create tcga brca molecular subtype matrices
Eleanor LewisEleanor Lewis
95d6e8e9639update target compendium loader script
Eleanor LewisEleanor Lewis
1f14d48a944MMerge pull request #33 in DAT/microservice-loader from feature/add-zscores-for-all-matrices to develop* commit '8931fd508b208fdbac2e1fc3aa9ae8e10e917d8d': remove debugging code remove debugging code uncomment funcs add script to load zscores and script to double-check qc output add script to double check actual zscores and load new
Eleanor LewisEleanor Lewis
8931fd508b2remove debugging code
Eleanor LewisEleanor Lewis
b29f6435f34remove debugging code
Eleanor LewisEleanor Lewis
dd8b65c9bdcuncomment funcs
Eleanor LewisEleanor Lewis
9fc0c4df435MMerge pull request #32 in DAT/microservice-loader from feature/VDB-1480-add-target-rhabdoid-compendia to develop* commit '52d7e7b233d63a06555160158e7bd244e1d628c7': move remaining 2021 scripts into 2021 directory add boilerplate, remove old test db setup update validator to allow mixed sources; improve loaderVDB-1480
Eleanor LewisEleanor Lewis
9b05c45dc4fadd script to load zscores and script to double-check qc output
Eleanor LewisEleanor Lewis
8c2534d1b01add script to double check actual zscores and load new
Eleanor LewisEleanor Lewis
52d7e7b233dmove remaining 2021 scripts into 2021 directory
Eleanor LewisEleanor Lewis
55d7f1ef1b6MMerge branch 'develop' of https://svn.bcgsc.ca/bitbucket/scm/dat/microservice-loader into feature/VDB-1480-add-target-rhabdoid-compendiaVDB-1480
Eleanor LewisEleanor Lewis
e88af73ec49add boilerplate, remove old test db setup
Eleanor LewisEleanor Lewis
ee4f7034e43update validator to allow mixed sources; improve loader
Eleanor LewisEleanor Lewis
bc12c4ccd48MMerge pull request #31 in DAT/microservice-loader from feature/add-mixed-coverage-source-handling to develop* commit '531032ff23dde09006634e08d37685b272e42c42': remove file not intended for this branch make mapping to given gene_id the default add tests and sql fixes add loading mixed coverage comment updates
Eleanor LewisEleanor Lewis
d63ccea3dacMMerge pull request #30 in DAT/microservice-loader from feature/VDB-1368-add-adult-pog-polya-matrix to develop* commit '7f6720865e8f1c9511a05535da955c6409e75ed4': add script to load adult pog poyla matrixVDB-1368
Eleanor LewisEleanor Lewis
3fefd6784e6MMerge pull request #29 in DAT/microservice-loader from feature/VDB-1481-add-tcga-brca-subtype-matrices to develop* commit '2ce7382d64762ad044f1bf68cbb622c09b291f01': add script to load tcga brca subtype matricesVDB-1481
Eleanor LewisEleanor Lewis
c9b93a6802aMMerge pull request #28 in DAT/microservice-loader from feature/VDB-1396-add-magic-matrices to develop* commit 'b38ebac6d2086a4ab0447bf20828f0e72344229a': add script to load magic matricesVDB-1396
Eleanor LewisEleanor Lewis
dfad53f6f21MMerge pull request #27 in DAT/microservice-loader from feature/VDB-1424-add-target-solid-and-hematologic.py to develop* commit '365564b555a70f3d87ab7f551c60c37b8bdb427f': add script to load target solid and hematologic matricesVDB-1424
Eleanor LewisEleanor Lewis
531032ff23dremove file not intended for this branch
Eleanor LewisEleanor Lewis
7e9b9e9e9d8make mapping to given gene_id the default
Eleanor LewisEleanor Lewis
88c5e1f5b59add tests and sql fixes
Eleanor LewisEleanor Lewis
30c6670864fadd loading mixed coverage
Eleanor LewisEleanor Lewis
ad2260ca15cMMerge pull request #26 in DAT/microservice-loader from feature/add-boilerplate-and-organize-old-scripts to develop* commit 'ab13b95538397102a069631c276374127e141766': move 2021 scripts to 2021 dir add boilerplate matrix loading script
Eleanor LewisEleanor Lewis
b145b6e5f48comment updates
Eleanor LewisEleanor Lewis
ab13b955383move 2021 scripts to 2021 dir
Eleanor LewisEleanor Lewis
2a3c67591dcadd boilerplate matrix loading script
Eleanor LewisEleanor Lewis
2ce7382d647add script to load tcga brca subtype matrices
Eleanor LewisEleanor Lewis
1544acaf951MMerge pull request #25 in DAT/microservice-loader from feature/add-log-zscores to develop* commit 'f9cfa0f3162b2c34a86b225c7c89ab4e8e4e61fc': add handling of approximately zero values simplify script/use updated loader add script to add zscores on log vals to existing matrices
Eleanor LewisEleanor Lewis
f9cfa0f3162add handling of approximately zero values
Eleanor LewisEleanor Lewis
1e2807d0a6fMMerge pull request #24 in DAT/microservice-loader from feature/add-log-zscores to develop* commit 'd2c7fd0cfb27038449e32fd5cdbff874c06150a3': add zscores on log and update tests bump vardb-schema veersion requirement
Eleanor LewisEleanor Lewis
18498c9f70fsimplify script/use updated loader
Eleanor LewisEleanor Lewis
811e43c5027add script to add zscores on log vals to existing matrices
Eleanor LewisEleanor Lewis
d2c7fd0cfb2add zscores on log and update tests
Eleanor LewisEleanor Lewis
1fa08204467bump vardb-schema veersion requirement