Data-sharing Applications Team
  1. Data-sharing Applications Team

knowledgebase_datafixes

Public
AuthorCommitMessageCommit dateIssues
Shirley ShuShirley Shu
dceb7764c85MPull request #45: Bugfix/KBDEV-1262 error when expanding graph view for specific disease typeMerge in DAT/knowledgebase_datafixes from bugfix/KBDEV-1262-error-when-expanding-graph-view-for-specific-disease-type to master * commit '66b8810348fdc6bb949102ff6b0fbe0340ffef17': soft delete edges that point to deleted nodesKBDEV-1262
Shirley ShuShirley Shu
66b8810348fsoft delete edges that point to deleted nodes
Mathieu LemieuxMathieu Lemieux
2dd7a845dbaMPull request #44: Add cancerGeneList_240815.tsv to /data for KBDEV-1245Merge in DAT/knowledgebase_datafixes from datafix/KBDEV-1245-data to master * commit '96aeb357f04153d7ddec8fd67d8bc393ac7a5827': Add cancerGeneList_240815.tsv to /data for KBDEV-1245KBDEV-1245
mathieulemieuxmathieulemieux
96aeb357f04Add cancerGeneList_240815.tsv to /data for KBDEV-1245KBDEV-1245
Mathieu LemieuxMathieu Lemieux
fa57aa84fa7MPull request #43: Datafix for KBDEV-994 & KBDEV-1253Merge in DAT/knowledgebase_datafixes from datafix/KBDEV-994-KBDEV-1253-sosmic-signatures to master * commit '154694cd838a4b890874f09987c9f7c89810f3cb': Datafix for KBDEV-994 & KBDEV-12532 Jira issues
Shirley ShuShirley Shu
e6a1fbb224eMPull request #42: remove all moa statementsMerge in DAT/knowledgebase_datafixes from bugfix/KBDEV-993-Remove-all-MOA-statements to master * commit '5be5daeb7f39a04f88addc0bc269078b346e9574': remove all moa statementsKBDEV-993
mathieulemieuxmathieulemieux
154694cd838Datafix for KBDEV-994 & KBDEV-12532 Jira issues
Shirley ShuShirley Shu
5be5daeb7f3remove all moa statements
Mathieu LemieuxMathieu Lemieux
b49e843701cMPull request #41: KBDEV-1252Merge in DAT/knowledgebase_datafixes from datafix/KBDEV-1252-error-when-trying-to-add-review-to-statements to master * commit 'aa75cb3e540f24589f4ff39e784defb4fde2b598': typo in logs KBDEV-1252KBDEV-1252
mathieulemieuxmathieulemieux
aa75cb3e540typo in logs
mathieulemieuxmathieulemieux
ad949676f81KBDEV-1252KBDEV-1252
Mathieu LemieuxMathieu Lemieux
0aa95424b21MPull request #40: Datafix/KBDEV-1245 oncokb cancer gene list updateMerge in DAT/knowledgebase_datafixes from datafix/KBDEV-1245-oncokb-cancer-gene-list-update to master * commit '57b6e0552963fe068508c4dc30c93c3a58b2f78a': KBDEV-1245 Emulate Set methods not avail. prior to Node v20KBDEV-1245
mathieulemieuxmathieulemieux
57b6e055296KBDEV-1245KBDEV-1245
mathieulemieuxmathieulemieux
c54bb328900Emulate Set methods not avail.prior to Node v20
Shirley ShuMathieu LemieuxShirley Shu
ec77a1fc08bMPull request #38: bugfix/KBDEV-1197-Dealing-with-duplicates-in-ClinicalTrialMerge in DAT/knowledgebase_datafixes from bugfix/KBDEV-1197-Dealing-with-duplicates-in-ClinicalTrial to master * commit '9548551ccf93a62129f12abbf78ad00f0190f180': remove duplicates in clinicaltrialsKBDEV-1197
Mathieu LemieuxMathieu Lemieux
95e1133a35fMPull request #39: KBDEV-1240Merge in DAT/knowledgebase_datafixes from datafix/KBDEV-1240-update-gene-description to master * commit '839e546a43fd36fe2054b1e67e59d216d98b5ada': KBDEV-1240KBDEV-1240
mathieulemieuxmathieulemieux
839e546a43fKBDEV-1240KBDEV-1240
Shirley ShuShirley Shu
9548551ccf9remove duplicates in clinicaltrials
Mathieu LemieuxMathieu Lemieux
11eae6c35d3MPull request #32: KBDEV-1086Merge in DAT/knowledgebase_datafixes from datafix/KBDEV-1086-copy-variant-links to master * commit '0006e68be2b1d4b5dc07a2ebaba70808ca525837': Change update Edge to delete Edge Fix const keyword missing KBDEV-1086KBDEV-1086
mathieulemieuxmathieulemieux
0006e68be2bChange update Edge to delete Edge
Shirley ShuShirley Shu
5008a79bc87MPull request #37: Task/KBDEV-1128 Testing orientjs v3.2 on relevant gkb reposMerge in DAT/knowledgebase_datafixes from task/KBDEV-1128-Testing-orientjs-v3.2-on-relevant-gkb-repos to master * commit '245bbe5dae78e71fc8e10c7b246577484b2e1d69': update to orientjs v3.2KBDEV-1128
Shirley ShuShirley Shu
245bbe5dae7update to orientjs v3.2
Mathieu LemieuxMathieu Lemieux
463ed447471MPull request #36: KBDEV-1184Merge in DAT/knowledgebase_datafixes from datafix/KBDEV1184-UGT1A1-pharmacogenomic to master * commit '24123962a4e501ff83aaa15acdf28ba93c2a5c7b': KBDEV-1184KBDEV-1184
mathieulemieuxmathieulemieux
24123962a4eKBDEV-1184KBDEV-1184
Shirley ShuShirley Shu
40117c16e1eMPull request #35: Bugfix/KBDEV-1069 minor datafix update deprecated type terms not flagged accordinglyMerge in DAT/knowledgebase_datafixes from bugfix/KBDEV-1069-minor-datafix-update-deprecated-type-terms-not-flagged-accordingly to master * commit '77c186b8be7680f62ab1ab4485d2e26047aba22b': update deprecated flag to match the out deprecatedby edges update deprecated type terms not flaggedKBDEV-1069
Shirley ShuShirley Shu
77c186b8be7update deprecated flag to match the out deprecatedby edges
Shirley ShuShirley Shu
c7219e00108update deprecated type terms not flagged
Shirley ShuShirley Shu
9ac6187edfbMPull request #31: Datafix/KBDEV 846 fix pubmed URLs to new pubmed URLMerge in DAT/knowledgebase_datafixes from datafix/KBDEV-846-fix-pubmed-URLs-to-new-pubmed-URL to master * commit '70515b3a0700283598d3f7f3cc9d184d3f672658': put queries together and linter things update method for array transform put two query together update name, displayName, journalName for pubmet records with no url add user and timeStamp to query update pubmed URLs which were ...KBDEV-846
Shirley ShuShirley Shu
e9afbb7b56fMPull request #33: KBDEV-1085 Changing Edge class linking Disease term 'all solid tumors'Merge in DAT/knowledgebase_datafixes from bugfix/KBDEV-1085-changing-edge-class-linking-disease-term-all-solid-tumors to master * commit '6a9529e362c9b36846112314e114d7a4cc8104e0': remove parm user and timestamp add some ticket explantion and remove user and timestamps remove blank lines delete elementOf edges linking all solid tumorsKBDEV-1085
Shirley ShuShirley Shu
6a9529e362cremove parm user and timestamp
Shirley ShuShirley Shu
38459e5d280add some ticket explantion and remove user and timestamps
Shirley ShuShirley Shu
5c5075f865bremove blank lines
Shirley ShuShirley Shu
1ca36806f50delete elementOf edges linking all solid tumors
mathieulemieuxmathieulemieux
4bbaa7cd940Fix const keyword missing
Shirley ShuShirley Shu
70515b3a070put queries together and linter things
Shirley ShuShirley Shu
d26302c9aa1update method for array transform
Shirley ShuShirley Shu
3aa046aff03put two query together
Shirley ShuShirley Shu
6bb224839f9update name, displayName, journalName for pubmet records with no url
mathieulemieuxmathieulemieux
a00bb5cc99aKBDEV-1086KBDEV-1086
Shirley ShuShirley Shu
1b6ba78eb56add user and timeStamp to query
Shirley ShuShirley Shu
973f8205d0cupdate pubmed URLs which were null
Mathieu LemieuxMathieu Lemieux
c9c391a9d71MPull request #30: Datafix/KBDEV-1084 cancer gene list 4Merge in DAT/knowledgebase_datafixes from datafix/KBDEV-1084-cancer-gene-list-4 to master * commit '80055bcf29310ae0743a860d3325840e5ad631cf': KBDEV-1084 Add TSO500 data file Add parseCsv in utilKBDEV-1084
mathieulemieuxmathieulemieux
80055bcf293KBDEV-1084KBDEV-1084
mathieulemieuxmathieulemieux
f9b141ba51bAdd TSO500 data file
mathieulemieuxmathieulemieux
e4cb9a972a0Add parseCsv in util
Mathieu LemieuxMathieu Lemieux
ffb07ccb22dMPull request #29: Datafix/KBDEV-1100 update entrez genesMerge in DAT/knowledgebase_datafixes from datafix/KBDEV-1100-update-entrez-genes to master * commit '18cf1730c6c16e5abe20846226587373e103e90c': KBDEV-1100 Update package-lock.jsonKBDEV-1100
mathieulemieuxmathieulemieux
18cf1730c6cKBDEV-1100KBDEV-1100
mathieulemieuxmathieulemieux
ce927a40622Update package-lock.json
Mathieu LemieuxMathieu Lemieux
3878d13b981MPull request #28: SDEV-3872 take II: Fix with proper coordinatesMerge in DAT/knowledgebase_datafixes from datafix/SDEV-3872-2 to master * commit 'e9a03bb4b386a151c7c89bcb0841bb38885187d9': Fix with proper coordinatesSDEV-3872
mathieulemieuxmathieulemieux
e9a03bb4b38Fix with proper coordinates